Resources

In my GitHub personal page you can find a brief introduction to bioinformatics. There, I explain the most common bash commands that bioinformaticians usually deal with.

Take it as a friendly resource for accessing commonly used commands in early bioinformatics.

Tired of tedious phylogenetic pipelines to generate species trees after a successful BUSCO analysis? Fed up with wasting time copying and pasting commands to align, trim sequences, and infer trees?

Here's the solution! Let phySCO transform your workflow today!

phySCO is an all-in-one python tool that (i) takes the output of a series of BUSCO analysis, (ii) retrieve ubiquitous single-copy BUSCO orthologs, (iii) align and trim them, and then (iv) infer the corresponding ML phylogenetic tree using a partitioned analysis. Enjoy it!

Here you can find the pdfs of posters where I was involved. Posters that I personally presented are indicated by a DNA symbol. Click on the titles to see the full posters and download them!

• The rise of Branchiopoda genomics: the state of the art and future challenges. SMBE 2023. Ferrara, Italy. Jul 23 – 27, 2023.
• Comparing different dating methods on branchiopod phylogeny: MCMCtree and lsd2. SMBE 2023. Ferrara, Italy. Jul 23 – 27, 2023.
• 🧬Clues of accelerated molecular evolution in gene families associated wit sex determination in bivalves. SIBE/ISEB 2022. Ancona, Italy. Sep 4 – 7, 2023.
• 🧬 First insights and comparative genomics of Hox and ParaHox genes in tadpole shrimps. EuroEvoDevo 2022. Naples, Italy. May 31 – Jun 3, 2023.

In my free-time I also like drawing. And sometimes I try to merge this hobby with my research work and get custom illustrations to use on papers and/or other publications.

Feel free to get in touch if you may need something of this kind ✏️🖍️

• Animal icons. These have been used to decorate phylogenetic trees, plots and other paper figures. Up to now, I've mostly focused on organisms that I personally study (i.e., branchiopods and bivalves).